PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS59766.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 78aa    MW: 8942.25 Da    PI: 7.6844
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS59766.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.43.9e-066471454
                HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                d+i + +++L  l+P+  ++ +  K+s   +L+++++YI+ L
  EPS59766.1  6 DQIVDLISKLTLLVPEiHPHRRTHKVSAEKVLQETCDYIRRL 47
                688899**********99777777788888**********99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.96E-6663IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.7E-7663IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    Send to blast
SRLTHDQIVD LISKLTLLVP EIHPHRRTHK VSAEKVLQET CDYIRRLKRE VDDLSARLSD  60
IIQSTDADQA AVIRSLLT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010551862.11e-28PREDICTED: transcription factor PRE1-like
SwissprotQ9LJX13e-28PRE5_ARATH; Transcription factor PRE5
TrEMBLS8C5R33e-48S8C5R3_9LAMI; Protein banquo 3 (Fragment)
STRINGAT3G28857.17e-26(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35324161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.12e-29bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]